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New Long Read Assemblers for De Novo Genomes Promise Speed, Scalability

Aug 22, 2019 | News

New Long Read Assemblers for De Novo Genomes Promise Speed, ScalabilityGenomeWeb |  Andrew P. Han | Aug 16, 2019NEW YORK – Newly released algorithms can assemble de novo human genomes from long read sequencing data in just a few hours’ time. Shasta, an in-memory...
Telomere-to-telomere assembly of a complete human X chromosome

Telomere-to-telomere assembly of a complete human X chromosome

Aug 16, 2019 | Publications

Karen H Miga, Sergey Koren, Arang Rhie, Mitchell R Vollger, Ariel Gershman, Andrey Bzikadze, Shelise Brooks, Edmund Howe, David Porubsky, Glennis A Logsdon, Valerie A Schneider, Tamara Potapova, Jonathan Wood, William Chow, Joel Armstrong, Jeanne Fredrickson, Evgenia...

Sequence tube maps: making graph genomes intuitive to commuters

Aug 7, 2019 | Publications

Abstract Motivation Compared to traditional haploid reference genomes, graph genomes are an efficient and compact data structure for storing multiple genomic sequences, for storing polymorphisms or for mapping sequencing reads with greater sensitivity. Further, graphs...

Recent Posts

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  • UC Santa Cruz to lead data collection center for major federal project on genetic underpinnings of neurological conditions
  • Genome of famed sled dog Balto reveals genetic adaptations of working dogs

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